Originally published online as doi:10.1189/jlb.1103554 on February 24, 2004
Published online before print February 24, 2004
(Journal of Leukocyte Biology. 2004;75:973-981.)
© 2004
by Society for Leukocyte Biology
The roles of transcription factors in B lymphocyte commitment, development, and transformation
Emma Smith and
Mikael Sigvardsson1
Department for Hematopoietic Stemcellbiology, Stemcell Center, Lund University, Sweden
1 Correspondence: Department for Hematopoietic Stemcellbiology, Stemcell Center, Lund University, BMC B12, 221 84, Lund, Sweden. E-mail: Mikael.Sigvardsson{at}stemcell.lu.se

ABSTRACT
Studies of normal blood cell development and malignant transformation
of hematopoietic cells have shown that the correctly regulated
expression of stage- and lineage-specific genes is a key issue
in hematopoiesis. Experiments in transgenic mice have defined
a number of transcription factors such as SCL/Tal, core-binding
factor/acute myeloid leukemia, and c-myb, all crucial for the
establishment of definitive hematopoiesis and development of
all blood cell lineages. Other regulators such as IKAROS, E47/E2A,
early B cell factor, Sox-4, and B cell-specific activator protein
(Pax-5) appear crucial, more or less selectively, for B lymphopoiesis,
allowing for detailed analysis of the development of this lineage.
In addition, several of these transcription factors are found
translocated in human tumors, often resulting in aberrant gene
expression or production of modified proteins. This article
concerns the role of transcription factors in B lymphoid development
with special focus on lineage initiation and commitment events
but also to some extent on the roles of transcription factors
in human B lymphoid malignancies.
Key Words: hematopoietic cells early B cell factor B cell-specific activator protein E2A B lineage malignancies

HALLMARKS OF B LYMPHOCYTE DEVELOPMENT
The pluripotent hematopoietic stem cell (HSC) gives rise to
all mature cell types in the blood (lymphoid, myeloid, and erythroid)
by differentiating through intermediate stage progenitor cells
displaying a progressive restriction in multilineage potential
[
1
]. The understanding of the processes regulating the differentiation
of a HSC into a mature immunoglobulin (Ig)-secreting plasma
cell has increased during recent years, making it possible to
use this pathway as a model system for cell development. B cell
development in mouse and humans has been extensively reviewed
[
1
2
3
] (
Fig. 1
), and the following section will just briefly
mention defined stages of B cell development and functional
roles of some of the proteins produced at specific times in
development.
An apparently common feature between man and mouse is the need
for the pre-B cell receptor, composed of the newly rearranged
Ig heavy chain and surrogate light chains, to allow the early
pre-B cells to enter the late pre-B cell stage [
4
]. The ordered
rearrangement process, proceeding from DJ of both alleles
to VDJ rearrangements [
3
4
5
], produces a large
number of antigen-binding specificities. However, several of
these newly formed genes will encode truncated proteins as a
result of junctional diversity introducing frame-shift mutations
or stop codons. To avoid production of immunoincompetent B cells,
there exists a need to investigate whether the recombination
process has generated a functional IgH gene. This is achieved
by cell-surface exposure of IgH protein produced from the newly
rearranged Ig gene in complexes with the surrogate light chains

5 and Vpre-B to form the pre-B cell receptor [
4
]
(Fig. 1)
.
The complex will signal through the coreceptor molecules Ig
and Igß, encoded by the
mb-1 and
B29 genes, respectively,
and thereby block further IgH rearrangements to prevent the
formation of two functional heavy-chain genes in the same B
cell [
4
]. The large dependence of the correct assembly of this
complex has been supported in mouse models, as gene disruption
of the IgM constant part or any of the surrogate light-chain
genes results in a block of B cell development at the early
pre-B cell stage [
4
]. Cells capable of displaying a pre-B cell
receptor expand their numbers through a proliferative burst
(Fig. 1)
, where after, they initiate the recombination of the
IgL genes to display a

or

light chain in complex with the
IgH protein on the cell surface [
4
]. The immature B cell expresses
a cell-specific surface IgM and can be selected against autoimmune
specificities before it is allowed to leave the bone marrow
and enter the circulation [
2
,
3
]. The newly produced cells
home to secondary lymphoid organs, where they mature further
into immunocompetent B cells, which after antigen encounter
and T cell support, can differentiate into Ig-secreting plasma
cells [
6
,
7
].
The completion of this developmental pathway, composed of several defined stages each with partly unique gene expression patterns, demands a strict regulation of transcriptional activity. This is a task achieved mainly by the concerted action of different transcription factors acting in stage- and context-dependent manners, placing these proteins in key positions during B lymphopoiesis. The main focus of this article is gene regulation at the early stages of development and modified transcription factor activities in malignant B cells. This involves initiation of the developmental pathway, lineage commitment as well as transformation. These processes have been investigated extensively, forcing us to refer to a limited number of the important contributions made to this field, and we therefore wish to apologize to those whose work is not fully cited in this article.

ESTABLISHMENT OF A FUNCTIONAL HIERARCHY AMONG TRANSCRIPTION FACTORS IN B CELL DEVELOPMENT
To understand how differentiation proceeds, it is of large importance
to establish the order of events and the genetic links bridging
them to each other. Information about this can be based on sequential
gene-expression patters, but the relevance of the data is substantially
increased if functional aspects can be taken into account. The
sequential need of transcription factors in B cell development
has been rather well defined with regard to expression patterns
(Fig. 1)
and functional properties. Much information has come
from studies of the biological phenotypes of mice carrying homologous
disruption of transcription factor coding genes (
Fig. 2
). The
transcription factors SCL-Tal, acute myeloid leukemia (AML)-1,
and c-myb are all crucial for the establishment of the entire
adult hematopoietic system, while the role of other factors
appears to be more or less specific for the B lineage. One factor
crucial for early stages of lymphopoiesis is the Zn-finger protein
Ikaros [
8
]. This protein belongs to a family of transcription
factors able to form homo- and heteromeric complexes expressed
in stage- and tissue-specific manners during hematopoietic development
[
9
10
11
]. Homologous disruption of the Ikaros-coding gene
results in a complete block of B cell development and severe
disturbances in the development of certain T cell populations
[
8
]. The exact function of Ikaros in lymphopoiesis is still
under investigation, but it appears as if the protein plays
an important role in silencing genes, possibly by the participation
in nuclear relocalization of chromatin into transcriptionally
silent centromeric domains in the nucleus [
11
,
12
]. The Ets
protein Pu.1 is also playing an important role already in the
uncommitted progenitor cell [
13
], and it appears to be crucial
for B cell and macrophage development [
14
,
15
]. Pu.1 has been
suggested to be involved in the regulated expression of the
high-affinity IL-7R on the progenitor B cell [
16
], a role possibly
explaining some of the importance of this protein in early B
cell development. An early block in B cell differentiation was
also observed in mice carrying a disrupted E2A gene [
17
,
18
].
This gene encodes two basic HLH (bHLH) transcription factors,
E12 and E47, generated by alternative splicing of the DNA-binding
domain. Mice lacking the E2A gene develop apparently normal
myeloid and erythroid lineages, while lymphoid development is
impaired [
17
,
18
]. Some T cells develop into maturity, but
the mice are prone to T cell tumor development [
19
], and they
also display a lack of B-lineage cells [
17
,
18
]. No recombination
events of IgH genes were detected, and little or no expression
of B cell-restricted genes could be found [
17
,
18
,
20
]. A
similar phenotype could be observed in mice lacking the transcription
factor EBF, as their bone marrow do no not contain any DJ
rearrangements or expression of pre-B cell-restricted genes
[
21
]. The marrow of these mice did, however, contain cells
with surface expression of CD43 and B220, indicating that they
had made a lineage choice to become early pro-B cells before
their developmental arrest [
21
]. Bone marrow cells from these
mice also expressed sterile transcripts from the IgH locus.
These transcripts do not encode any protein but are presumed
to precede the rearrangement events by making the DNA accessible
for the recombination machinery [
2
,
3
]. However, the cells
did not express any of the
Rag genes, and coordinantly, no recombination
events could be detected [
21
]. Another dramatic phenotype could
be observed in mice lacking the transcription factor BSAP (Pax-5)
[
22
,
23
]. The bone marrow but not the fetal liver of these
mice contained progenitor B cells with expression of several
B-lineage genes including
5,
VpreB, and
mb-1, and they also
contained DJ heavy chain (DJH) and rare
VDJH rearrangements [
22
,
23
]. A similar
phenotype was observed in mice lacking the HMG protein Sox-4
[
24
]. However, the Sox-4-deficient pro-B cells displayed a
proliferation defect in response to IL-7 that could not be observed
in the absence of BSAP and that appears to be the major cause
of the phenotype in the Sox-4-deficient mice [
24
]. The transition
from the late pre-B cell stage into the immature B cell stage
is impaired in mice double-deficient for the Pu.1-associated
proteins Pip and interferon consensus sequence-binding protein
(ICSBP) [
25
]. Pre-B cells from these mice display deficiencies
in light-chain recombination events that might be explained
by the direct activity of a Pu.1/Pip (ICSBP) complex on the

as well as

light-chain gene-enhancer elements [
25
]. The lack
of these proteins could then result in reduced germ-line transcription
and impaired recombination efficiency of the light-chain genes.
Although the transgenic mouse models have produced essential
information about the stage dependency of the investigated transcription
factors, they still provide limited information concerning genetic
networks and the links between the different stages of development.
To understand this part of the process, it is crucial to identify
the genes regulated by the transcription factors at each differentiation
stage (
Fig. 3
). The investigations in transgenic mice described
above suggest that E2A gene products are participating in the
initiation and specification of the B lineage. This idea is
also supported by the findings that E2A proteins are involved
in the regulation of the
IgH chain germ-line transcription,
Rag genes, and surrogate light-chain genes in the pro-B cell
[
26
27
28
]. E2A proteins also appear to activate transcription
of the
EBF gene [
28
,
29
], encoding a transcription factor
able to activate another set of genes characteristic of the
late pro-B cell to the early pre-B cell stage. In addition,
EBF has the ability to act in synergy with E2A proteins in the
activation of several target genes including the surrogate light-chain
genes [
27
] and in Ig recombination events [
30
,
31
]
(Fig. 3) . The importance of the collaborative action of E2A proteins
and EBF was shown in vivo, as mice trans-heterocygote for mutations
in the
E2A and
EBF genes displayed a much more dramatic impairment
in B cell development than any of the single heterocygote mice
[
32
]. In addition, EBF seems to be involved in the regulation
of the
mb-1 [
33
] and
B29 [
34
] genes, apparently coordinating
the expression of pre-B cell receptor components
(Figs. 1
and 3) . The genetic network around EBF appears conserved between
humans and mice, as the EBF-binding sites in the
mb-1 and
B29 promoters are conserved between species [
35
]. An even stronger
indication for the preserved roles of EBF and E2A in human and
mouse B cell development comes from studies of the genes encoding
the human pre-B cell receptor components 14.1 (

5) and Vpre-B.
These genes are structurally different from their mouse counterpart,
and the promoter elements display a low sequence similarity.
This results in the fact that the EBF- and E2A-binding sites
defined in the mouse are rendered incapable to bind the transcription
factors. However, the ability of the promoter elements to interact
with the transcription factors remains as a result of the presence
of other EBF- and E2A-binding sites rather than those found
in the mouse promoters [
35
,
36
], apparently conserving them
as target genes, although the primary DNA sequence has diverged.
Furthermore, EBF appears to be involved in an autoregulatory
loop [
29
], possibly driving differentiation of the cell that
has initiated development along the B lymphoid pathway. EBF
is also suggested to control the expression of BSAP/Pax-5 [
32
],
which in turn regulates expression of the
n-myc,
Lef-1,
BLNK,
mb-1,
Rag-2, and
CD19 [
37
38
39
] genes, many of which are associated
with the early pre-B cell stage. Pax-5 also appears to be crucial
for the definitive lock of the cell in the B lymphoid pathway
[
40
] (see below). Thus, investigations of mice carrying mutated
genes and identification of genetic targets for specific transcription
factors have resulted in a reasonable proposal for a functional
hierarchy of transcription factors in the early stages of B
cell development, where the action of E2A proteins promotes
expression of EBF, which in turn allows progression into a Pax-5-dependent
stage of development
(Fig. 2)
.

TRANSCRIPTION FACTOR FUNCTION IN B-LINEAGE CHOICE AND COMMITMENT
In addition to the progression of the differentiation pathway,
the process of lineage commitment is central in the understanding
of B cell development. Although much evidence points to a crucial
role for the E2A proteins in the initiation of B-lineage development,
the broad expression patterns of these proteins, within and
outside of the B lymphoid system [
41
], make it difficult to
understand how they can be involved in a specific lineage-initiation
process. The identification of a B cell-restricted E47 homodimer
[
17
,
42
] led to the hypothesis that this protein complex would
compose the tissue-specific component, rendering the E2A gene
such an essential role in the initiation of B-lineage development.
However, studies in transgenic mouse models showed that although
E47 appeared crucial for normal B cell development, expression
of E12 was sufficient to rescue the initial events leading to
progress along the B-lineage pathway [
20
]. One explanation
could be that the process is dependent of transcription-factor
doses rather then a direct presence or absence of the committing
factors. The concept of dose-dependent lineage choice has been
suggested from studies of the
Drosophila transcription factor,
daughterless, belonging to the same HLH family of transcription
factors as E2A gene products E12 and E47 [
43
].
Drosophila daughterless,
together with other sex-determining factors, are encoded by
the X-chromosome. This results in monoallelic expression in
male embryos, and female embryos express twice the amount of
the transcription factor, a dose difference contributing to
sex determination in the embryo [
44
]. In line with this, B
lymphoid development would be dependent on transcription-factor
doses rather than any specific factor per se. The E2A proteins
belong together with E2-2 and Heb to the E-protein family. These
bHLH proteins are able to form homo- or heterodimers with each
other. A functional redundancy among these proteins was elegantly
shown, as B cell development in mice lacking the crucial E2A
gene could be rescued by the insertion of a functional gene
encoding Heb into the E2A locus [
45
]. The concept of a dose-dependent
role of E-proteins was also supported by experiments, where
sequential disruptions of
E2-2-,
Heb-, and
E2A-encoding genes
resulted in increasing disturbances of B cell development [
46
]
and by the finding that transgenic expression of the E-protein
inhibitor Id-1 resulted in impairments of early B cell development
[
47
]. Another interesting aspect of the role of E2A proteins
comes from the finding that the functional activity of these
factors can be reduced by active Notch signaling in the cell-culture
systems [
48
]. The finding becomes even more interesting, as
expression of an active form of intracellular Notch in hematopoietic
progenitor cells results in a dramatic reduction of B cell development,
possibly in favor of T cell development [
49
]. This opens the
possibility that Notch provides an instructive signal for the
common lymphoid progenitor by reducing the functional activity
of E-proteins, resulting in impaired B cell development. Dose-dependent
functions of transcription factors have also been suggested
from studies of Pu.1-transduced progenitor cells, where high
expression of Pu.1 resulted in commitment into myeloid differentiation
rather than B cell faith [
15
], suggesting that the initiation
of B cell development well may be a result of a combined dosage
of a number of transcription factors.
The question of when commitment to the B lineage actually occurs was raised by studies showing that pro-B cells from Pax-5-deficient mice were able to differentiate into other hematopoietic cell types [40
]. These pro-B cells were able to differentiate into dendritic cells, macrophages, osteoclasts, granulocytes, and natural killer cells in vitro [40
] as well as into T cells in vivo [50
]. These differentiation processes were inhibited by ectopic expression of Pax-5 [40
], suggesting that the initiation of the genetic program to become a B cell is not obligatorily linked to commitment of the cell. Furthermore, B cell clones lacking Pax-5 are able to promote long-term reconstitution of myeloid and lymphoid cells in vivo, supporting the idea that pro-B cells are highly potent hematopoietic progenitors unless restricted by Pax-5 expression [51
, 52
]. The key role for Pax-5 in B-lineage development has now been further highlighted in transgenic mice, where the gene was rendered nonfunctional in immature [53
] or mature [54
] B cells, which resulted in an apparent loss of B cell identity and in an overexpression study, where the Pax-5 gene was placed under the control of the IKAROS locus [55
]. The latter mouse model displayed expression of Pax-5 already in the bone marrow stem cell, and although the myeloid and erythroid developmental pathways appeared largely unaffected, there was a reduction in T cell numbers, a finding possibly explained by a reduced Notch-1 expression in the early progenitors [55
]. The molecular mechanism underlying the power of Pax-5 may not reside in its ability to activate but rather to suppress gene expression. The protein has the ability to act as a repressor or as an activator, probably as a consequence of different promoter context and specific contact bases in the target DNA [56
]. Thus, Pax-5 can display activation or repression domains, one of the latter able to interact with repressors of the Grucho family of histone deacetylases [57
]. Genes that have been suggested to be suppressed by Pax-5 include the M-CSFR [40
] and the Notch-1 gene [55
]. This can allow for a formulation of a hypothesis that the crucial activity of Pax-5 is coupled to an ability to make the B cell progenitor inert to the action of lineage-instructive signals, which would drive the cells into other cell fates. Thus, it appears as if the initiation of the B lymphoid pathway stimulated by E2A proteins can be manipulated, indicating that it is not a commitment process but rather a beginning of a genetic program distancing these two processes in the course of development.

TRANSCRIPTION FACTORS AND HUMAN B-LINEAGE MALIGNANCIES
In addition to their role in differentiation processes and lineage
fidelity, transcription factors also contribute directly to
tumor development (
Table 1
). One example is the translocation
of the c-myc oncogene involved in cell-cycle regulation and
apoptosis into the IgH or IgL chain locus observed in Burkitts
lymphoma [
59
]. This leads to deregulated expression of c-myc
as a result of the normal promoter and 5'-untranslated region
of the mRNA becoming deleted and the gene coming under control
of Ig transcriptional regulatory elements [
60
,
61
]. This results
in an increased transcription rate resistant to normal feedback
mechanisms as well as increased mRNA stability as a result of
deletion of destabilizing elements in the noncoding 5' part
of the mRNA [
62
]. The translocation could also result in an
increased frequency of point mutations as a result of the action
of the somatic hypermutation machinery normally operating in
this region, and point mutations affecting myc function are
detected [
63
,
64
]. The effect of the mutated protein may be
enhanced, as the normal myc allele often becomes silenced [
65
],
probably as a result of inhibitory feedback mechanisms activated
by the translocated allele.
Another gene frequently involved in translocations resulting
in aberrant gene expression is the transcriptional repressor
BCL6 [
66
,
67
]. This gene is translocated into a position that
renders it under the control of external control elements including
the IgH [
68
], IgL [
69
], histone H4 [70], small G protein TTF
[
71
], and heat shock protein 89a [
72
]. The noncoding part
of the BCL6 gene appears to be a natural target for somatic
hypermutation also in normal cells [
73
], and although the mutations
normally do not result in alterations of the amino acid composition
of the protein, there could be effects on translation efficiency
and mRNA stability, giving the protein oncogenic properties
even in the absence of translocation events.
Translocation into the Ig locus has also been reported for the transcription factor Pax-5 [74
, 75
]. The production of this protein is normally repressed on terminal B cell differentiation [76
], and deregulated expression could interfere with terminal differentiation [76
], contributing to the developmental arrest observed in NHL.
Transcription factors are also reported to be involved in translocations, resulting in the formation of fusion proteins dramatically altering the structure of the factors involved. One such example is the fusion between the E2A gene and the gene encoding the homeo-box transcription factor PBX observed in childhood pre-B leukemias [77
]. One role of the normal PBX protein is to modulate the function and DNA-binding activities of the Hox proteins [78
], which are known to modulate hematopoiesis [79
], and the formation of the E2APBX may cause alterations of Hox protein functions. One potential target gene for the E2APBX fusion protein is a gene encoding a wnt family growth factor [80
]. wnt proteins have been suggested to be involved in B cell development, as homologous disruption of the transcription factor Lef-1, which via an interaction with ß-catenin transmits the wnt signal into the cell nucleus, results in B cells with impaired proliferative abilities [81
]. The same signal-transduction pathway has also been shown to be a target for the transformation process in colon cancer, where mutations in ß-catenin or other components of the signal-transduction pathway, such as the adeno poliposis colon protein [82
, 83
], are commonly found. Thus, increased wnt signaling could be one potential explanation for the mechanistic action of the E2APBX fusion protein. E2A is also involved in t(17;19) translocations, resulting in a fusion protein composed of the transactivation domains of E2A and DNA-binding/dimerization domains of the transcription factor HLF [84
, 85
]. This HLFE2A fusion protein is able to transform embryonic fibroblasts [86
], possibly via induction of expression of the antiapoptotic Zn-finger transcription factor SLUG, which is presumed to be a direct target for the fusion protein [87
].
Although the molecular understanding of the functions of fusion proteins is beginning to be unraveled, there is still much to be learned about these tumor-associated factors. For instance, a significant number of childhood leukemias carry a t(12;21) translocation, resulting in a fusion protein between the Ets family transcription factor Tel and the runt domain protein core-binding factor (AML-1) [88
89
90
]. This fusion protein has not yet been shown to be able to transform cells by itself, but it may well act in a dominant manner in leukemia, as it will be acting in a genetic environment, lacking at least one normal allele of both proteins in the cell undergoing malignant transformation.
Another example of functional alterations of transcription factor function in oncogenesis relates to the ability of these proteins to act as tumor suppressors. One example is the p53 protein, directly involved in cell-cycle entry, which is inactivated in a large number of solid tumors and also in some cases of lymphoma [91
]. Among the transcription factors directly involved in B cell development, the gene encoding Ikaros has been found translocated in a diffuse pattern in human cancer [92
, 93
]. This could be an indication that the major cause of the tumorogenic effect is the disruption of the Ikaros gene itself. This idea is also supported by studies in mice, where lack of a functional Ikaros gene results in T cell lymphomas, indicating that Ikaros may have a role as a tumor-suppressor gene [8
, 94
]. The E2A gene also appears to act as a tumor suppressor, as mice that lack this protein frequently develop T cell tumors [95
] sensitive to reintroduction of the E2A proteins [96
]. This could be an effect of the fact that the E2A factors are involved in cell-cycle regulation, possibly by direct activation of the p21 promoter [97
].
Transcription factors are also playing important roles in virus-induced transformation processes. This could occur as a result of viral integrations near transcription factor-coding genes, resulting in transcriptional deregulation but also a result of direct effects of viral proteins on the transcription factor network. The Epstein Barr virus (EBV), suggested to be involved in the pathology of Burkitts lymphoma and Hodgkins disease [98
], produces at least six proteins that display direct effects on transcriptional regulation [99
]. EBV nuclear antigen (EBNA)-2 is a transcriptional activator crucial for the transformation of B lymphocytes [100]. The EBNAleader protein enhances the functional activity of EBNA-2 [101
], although the latter appears dispensable for B cell transformation [100]. The EBV genome is also encoding at least three transcriptional repressors, EBNA3A, -B, and -C, out of which EBNA3A and -3C are required for B cell transformation [102
]. EBNA1 is also a DNA-binding protein, and although it has mainly been associated with episome replication and transcription of the viral genome, the finding that transgenic expression of the factor in B-lineage cells results in malignancies indicates that more global effects on gene regulation are exerted by this protein [103
]. Thus, transcription factors appear able to promote malignant transformation by a number of different mechanisms, the knowledge of which could dramatically increase our understanding of oncogenic processes and possibly provide new possibilities to treatment and diagnosis of cancer.

CONCLUDING REMARKS
Genetic studies in mouse models as well as findings in human
malignancies have provided crucial evidence for essential and
in many cases unique roles for specific transcription factors
in hematopoiesis. An extensive search for genetic targets for
these factors has also provided a degree of clarity about how
these proteins are genetically linked and how they act to coordinate
gene-expression programs, findings that well may become useful
in clinical practice. There are, however, still dimensions of
gene regulation that are rather poorly understood. These include
the interplay between transcription factors and the nuclear
organization in a specific cell type. This is important, as
the structure of the chromatin is bound to largely affect the
ability of a given transcription factor to activate target genes.
There is also limited understanding about how cell cycle and
replication affect the activity of transcription factors. Both
of these aspects of gene regulation are now coming more into
focus in the field of research, promising a further increased
understanding of normal as well as malignant cell differentiation
in the near future.

ACKNOWLEDGEMENTS
Barncancer Fonden, Cancerfonden, Vetenskapsrådet, The
Crafoord, Åke Wibergs, and Kocks foundations and the Medical
Faculty at Lund University funded this work. We thank members
of the HSC laboratory and Dr. S. Cardell for helpful comments
and for critical reading of this manuscript.
Received November 11, 2003;
revised January 24, 2004;
accepted January 28, 2004.

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