

* Division of Clinical Pharmacology and
Division of Hematology and Oncology, Department of Internal Medicine, University of Munich, Germany
Correspondence: Gunther Hartmann, M.D., Department of Internal Medicine, University of Munich, Ziemssenstr. 1, 80336 Munich, Germany. E-mail: ghartmann{at}lrz.uni-muenchen.de
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Key Words: oligodeoxynucleotide lymphoma cationic lipids high-serum thymidine kinase
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It has been shown that the level of thymidine kinase activity in the serum (s-TK) of patients with B-CLL correlates with the proliferative activity of B-CLL cells [8 ]. s-TK is a cellular enzyme involved in a "salvage pathway" for DNA synthesis. Elevated systemic levels of s-TK predict a high risk of disease progression in patients with low-grade non-Hodgkins lymphoma and B-CLL [9 10 11 12 ].
Antisense oligodeoxynucleotides (ODN) are short, synthetic, single-stranded DNA molecules that can interfere theoretically with gene expression via heteroduplex formation with complementary sequences within the target messenger RNA [13 14 15 16 ]. Several antisense sequences against bcl-2 have been designed [17 18 19 20 ]. One of them (G3139) is being investigated in clinical trials as single therapy or in combination with chemotherapy for the treatment of chronic lymphocytic leukemia (B-CLL; phases II and III) [21 , 22 ] and for the treatment of solid tumors such as malignant melanoma (phase III), and prostate, colon, and small-cell lung carcinoma (phase II). However, antisense ODN may display other than antisense effects depending on the chemically modified backbone used to protect the ODN from rapid degradation and on particular sequence motifs [15 , 23 , 24 ]. This problem could be considerably reduced by the development of 2'-O-methoxyethyl-modified ODN [19 , 25 , 26 ] and other modifications [13 ]. Although new backbone modifications show higher and more specific antisense effects in vitro, most antisense ODN in clinical trials, including the bcl-2 antisense ODN, still use the "first generation" phosphorothioate backbone.
The phosphorothioate backbone of ODN costimulates human monocytes independently of the ODN sequence [27 ]. Furthermore, particular immunostimulatory sequence motifs have been identified, which contain a central, unmethylated CG dinucleotide within certain base contexts (CpG motifs). ODN, which contain such CpG motifs (CpG ODN), mimic bacterial DNA [28 29 30 31 32 33 ]. In vertebrate DNA, such CpG motifs are underrepresented and methylated [34 ]. This enabled the vertebrate-immune system to detect CpG motifs as a molecular pattern associated with bacterial DNA [35 ]. CpG ODN stimulate B cells and dendritic cells and provide excellent immune adjuvants for priming antigen-specific B and T cell responses [24 , 32 , 36 37 38 ].
CpG ODN not only stimulate normal B cells but also malignant B cells [39 40 41 ]. Although up-regulation of surface markers, such as costimulatory and antigen-presenting molecules, supports the immune system to recognize and eliminate malignant cells, concurrent induction of proliferation of malignant B cells may have the opposite effect. It has been shown that CpG ODN inhibit apoptosis of murine lymphoma cell lines [42 43 44 ], but the influence on apoptosis of primary human malignant B cells is not known.
The bcl-2 antisense ODN being tested in clinical trials contain two CG dinucleotides and a TC dinucleotide at the 5' end, both of which have been shown to promote immunostimulatory activity of a CpG ODN [33 ]. We speculated that this particular ODN interacts with malignant B cells, such as an immunostimulatory CpG ODN, rather than an antisense ODN. In the present study, we examined the effects of this ODN (G3139; antisense to bcl-2, two CG dinucleotides) on apoptosis and activation of human malignant B cells. The contribution of an antisense- versus a CpG-mediated mechanism was determined by including a well-established bcl-2 antisense ODN without CG dinucleotides (NOV 2009) and an established immunostimulatory CpG ODN (ODN 2006). We found that antisense-mediated inhibition of bcl-2 expression in malignant B cells by G3139 and by NOV 2009 was poor. In contrast, ODN-mediated modulation of malignant B cell activation and apoptosis depended on the presence of CG dinucleotides within the sequence and was correlated with s-TK activity of individual patients.
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Table 1. Spontaneous and ODN-Induced Changes of Apoptosis and Associated Markers of B-CLL Samples
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ODN
Phosphorothioate-modified ODN were provided by the Coley Pharmaceutical Group (Wellesley, MA) or purchased from Operon Technologies (Alameda, CA). Endotoxin levels in all ODN were <0.075 EU/ml, as determined by the Limulus amebocyte lysate assay (BioWhittaker, Walkersville, MD). The sequences were as follows (TC dinucleotide at 5' end and CG dinucleotides appear in bold letters): G3139 (antisense to bcl-2) [45
]: 5'-TCTCCCAGCGTGCGCCAT-3'; NOV 2009 (antisense to bcl-2) [18
]: 5'-AATCCTCCCCCAGTTCACCC-3'; ODN 2006 [33
]: 5'-TCGTCGTTTTGTCGTTTTGTCGTT-3'; ODN d(C20) (CpG-negative control): 5'-CCCCCCCCCCCCCCCCCCCC-3'. All ODN were stored in TE buffer (10 mM Tris, 1 mM ethylenediaminetetraacetate, pH 8.0) at -20°C. ODN were added in a final concentration of 0.08 µg/ml30 µg/ml, as indicated in the figure legends. In antisense experiments, GM697 cells were preincubated for 30 min with ODN (final concentration, 1 µM) and the cationic lipid lipofectin (final concentration, 27.2 µg/ml; Gibco-BRL), in a polystyrol tube (room temperature; ODN and lipofectin added at 20x concentration).
Immunofluorescence assays
At the time points indicated, cells were washed in ice-cold phosphate-buffered saline (PBS) and were stained for surface antigens as described previously [46
]. Monoclonal antibodies (mAb) against CD5 (UCHT2), CD19 (SJ25C1), CD20 (2H7), CD40 (5C3), CD54 (HA 58), CD69 (FN50), CD80 (L307.4), CD86 (IT2.2), major histocompatibility complex (MHC) I (G46-2.6), MHC II (TÜ39), and appropriate isotype controls were purchased from PharMingen (San Diego, CA). More than 80% of PBMC from patients with B-CLL were malignant B cells (positive for CD19 and CD5). Viable cells were gated according to their typical forward/side-scatter characteristics and propidium iodide (PI) staining, and B cells were identified by CD19 expression. For intracellular staining of apoptosis-related proteins, 1 x 106 cells were fixed and permeabilized ("Fix & Perm," Caltag, Burlingame, CA). Briefly, cells were washed with PBS (400 g, 4°C, 5 min), incubated for 15 min with fixation buffer A, washed again, and then incubated with permeabilization buffer B, together with 10 µl of fluorescein isothiocyanate (FITC)-labeled anti-bcl-xL mAb (7B2.5; Southern Biotechnology Associates, Birmingham, AL) and phycoerythrin-labeled anti-bcl-2 mAb (6CR) or the corresponding isotype antibodies (all from PharMingen). Finally, the cells were washed twice (400 g, 4°C, 5 min), resuspended in PBS, and analyzed immediately by flow cytometry using a FACScan (Becton Dickinson Immunocytometry Systems, San Jose, CA). Spectral overlap was corrected by appropriate compensation. Data were analyzed with the fluorescein-activated cell-sorter evaluation program FlowJo (version 2.7.8, Tree Star, Stanford, CA).
Apoptosis was assessed by annexin V and PI staining on all cells counted with an appropriate forward scatter (FSC) threshold. Approximately 1 x 106 cells were resuspended in 195 µl annexin V-binding buffer (10 mM Hepes/NaOH, 140 mM NaCl, 2.5 mM CaCl, pH 7.4) together with 5 µl FITC-labeled annexin V. After 15 min of incubation at room temperature in the dark, cells were washed with PBS and stained with PI (2 µg/ml) immediately before flow cytometry. The increase in the cell fraction positive for annexin V and PI compared with control samples was considered the increase in apoptotic cells.
Reverse transcriptase-polymerase chain reaction (RT-PCR)
B-CLL cells (35x105/sample) were lysed, and RNA was extracted (High-Pure lysis solution, total RNA isolation kit, Roche, Mannheim, Germany) and reverse transcribed (First Strand cDNA synthesis kit, Roche). For quantitation of bcl-2 and bcl-xL mRNA, target sequences were amplified by quantitative real-time PCR using the TaqMan® system (Applied Biosystems, Foster City, CA) according to the manufacturers protocol.
Statistics
Data are expressed as means ± SEM. Statistical significance of differences was determined by the paired two-tailed Students t-test or Wilcoxon test on absolute values. A P value of <0.05 was considered significant. Regression analysis was performed using the Spearman rank test. Statistical analysis was performed using the program StatView D-4.5 (Abacus Concepts, Berkeley, CA).
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We tested the ability of two well-established bcl-2 antisense ODN, G3139 [45 ] and NOV 2009 [18 ], to down-regulate bcl-2 expression in GM697 cells. Cells were incubated in the presence of ODN with or without lipofectin. Expression of bcl-2 was analyzed by flow cytometry. Inhibition of bcl-2 expression required the presence of lipofectin (Fig. 1 ). In the absence of lipofectin, bcl-2 levels in this particular cell line showed no major changes for both ODN.
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Figure 1. Inhibition of bcl-2 synthesis by bcl-2 antisense ODN requires the use of cationic lipids. GM697 cells were incubated with two different bcl-2 antisense ODN (non-CG-containing: NOV 2009; CG-containing ODN: G3139; all at 1 µM) with or without lipofectin (27.2 µg/ml). In samples with lipofectin, cells were washed after 4 h, and fresh medium was added for the remaining 12 h. After a total of 16 h, bcl-2 expression was examined by flow cytometry (MFI, mean fluorescence intensity, with baseline expression in the absence of ODN set as 100%). Bars indicate the mean ± range of three (medium control and G3139) or two (NOV 2009) independent experiments.
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PBMC were isolated from 13 patients with B-CLL (Table 1) . PBMC of all CLL patients contained >80% CD5- and CD19-positive, malignant B cells. PBMC were cultured in the presence of G3139 or NOV 2009 (30 µg/ml=5 µM). In preliminary experiments, we found a significant spontaneous uptake of fluorescein-labeled ODN in B-CLL cells. Unexpectedly, only 5 out of 13 patients showed inhibition of bcl-2 protein in response to G3139. On average, G3139 and NOV 2009 did not significantly change bcl-2 expression in B-CLL cells (G3139: P=0.65; Fig. 2A ). To determine if G3139-induced changes in individual patients were bcl-2-specific, we examined bcl-xL as a control protein. G3139, but not NOV 2009, increased bcl-xL expression consistently (Fig. 2A) . Changes on the protein level were confirmed by quantitative analysis of mRNA expression levels of bcl-2 and bcl-xL (Fig. 2B) .
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Figure 2. Modulation of bcl-2 and bcl-xL protein and mRNA in primary B-CLL cells by G3139 and ODN 2006 in the absence of cationic lipids. PBMC from patients with B-CLL were incubated for 48 h in the presence of the non-CG-containing bcl-2 antisense ODN (NOV 2009), the CG-containing bcl-2 antisense ODN (G3139), and the CpG ODN 2006, all at 30 µg/ml. The levels of bcl-2 and bcl-xL expression were determined on CD19+ B cells (>80% CD5+ malignant B cells). (A) bcl-2 protein analyzed by flow cytometry. Data are presented as means (±SEM) of relative values of 13 patients (G3139 and ODN 2006) or 11 patients (NOV 2009). (B) Quantitative real-time PCR. Data are presented as means (±SEM) of increased transcript numbers as compared with the control without ODN (five patients). Statistical evaluation was performed on absolute values using the Wilcoxon test.
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Figure 3. CpG-mediated up-regulation of bcl-xL and activation markers by G3139 in bcl-2-negative Burkitt lymphoma cells. The Burkitt lymphoma cell line Daudi JP, which does not express detectable levels of bcl-2, was incubated in the presence of G3139 (bcl-2 antisense) or ODN 2006, both at 6 µg/ml. After 24 h, expression of bcl-xL, CD54, CD80, and CD86 was measured by flow cytometry. Results are shown as means (±SEM) of six independent experiments.
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G3139 stimulates B-CLL cells in a similar way as ODN 2006
CpG ODN have been demonstrated to stimulate human malignant B cells to express higher levels of costimulatory and antigen-presenting molecules [39
40
41
]. If G3139 shared immunostimulatory properties with ODN 2006, G3139 should not only induce bcl-xL but should also activate human malignant B cells. Indeed, at the relatively high concentration tested, G3139 as well ODN 2006 stimulated the expression of high levels of CD54, CD80, and CD86 in Daudi JP cells (Fig. 3)
. Furthermore, cells increased in size and granularity in response to G3139 and ODN 2006 (not shown).
Both bcl-2 antisense sequences, G3139 and NOV 2009, are completely phosphorothioate-modified ODN. To exclude the possibility that the phosphorothioate backbone itself rather than the specific CG dinucleotide-containing sequence of G3139 is responsible for the immunostimulatory properties, we compared G3139 and ODN 2006 with the non-CpG ODN NOV 2009 for their ability to increase the expression of a panel of surface markers (CD20, CD40, CD69, CD80, CD86, CD54, MHC I, and MHC II) in B-CLL cells from nine different patients. G3139 as well as ODN 2006 up-regulated all markers tested, and NOV 2009 was essentially inactive (Fig. 4A ). The entire population of CD19- and CD5-positive malignant B cells responded to G3139 (Fig. 4B) and ODN 2006 (not shown). These results confirmed the immunologic properties of G3139 in primary malignant B cells.
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Figure 4. Activation of primary B-CLL cells by G3139 and ODN 2006, but not NOV 2009. PBMC from patients with B-CLL were incubated with the bcl-2 antisense ODN G3139 or NOV 2009, both at 6 µg/ml. After 48 h, viable CD19-positive cells were analyzed by flow cytometry. (A) Results represent means of nine independent experiments (±SEM). (B) The analysis of G3139-induced CD86 expression in PBMC of one representative patient with B-CLL is shown. The upper panel identifies subpopulations of cells within PBMC based on the expression of CD5 and CD19. Numbers indicate the percentage of gated cells of all viable cells. In the lower panel, CD86 expression of malignant B cells (CD5- and CD19-positive; black curves) and CD5-positive/CD19-negative cells (gray curves) is depicted.
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Figure 5. Dose-dependent activation of primary B-CLL cells by G3139 and ODN 2006, but not by ODN, without CpG motif. Primary B-CLL cells were incubated with increasing concentrations of G3139, NOV 2009, ODN 2006, and the control ODN d(C20). After 48 h, CD86 expression on CD5/CD19 double-positive B-CLL cells was determined by flow cytometry. Data are shown as MFI. Results represent the means of two independent experiments.
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Figure 6. Correlation of G3139- and ODN 2006-induced changes of apoptosis-associated markers, costimulatory- and antigen-presenting molecules. PBMC from 13 patients with B-CLL were incubated with G3139 and ODN 2006 (30 µg/ml). After 48 h, the expression of bcl-2 and bcl-xL (MFI), the rate of apoptosis and proliferation, as well as CD86 and MHC II expression were measured. ODN-induced changes (for bcl-2, bcl-xL, apoptosis, and proliferation-baseline expression in the absence of ODN was set as 100%) for G3139 (x-axis) and ODN 2006 (y-axis) are compared. Statistical analysis was performed using the Spearman rank test.
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Figure 7. s-TK activity and CpG ODN-induced modulation of apoptosis in B-CLL. B-CLL cells were incubated in the presence of G3139 and ODN 2006 at 30 µg/ml for 48 h. (A) Induction of apoptosis by G3139 and ODN 2006 (x-fold increase compared with control without ODN; not statistically significant). (B) Correlation of G3139-induced changes in apoptosis and the level of s-TK. (C) Correlation of G3139-induced changes of apoptosis and proliferation (proliferation values available for six patients; see Table 2
).
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View this table: [in a new window] |
Table 2. ODN-Induced B-Cell Proliferation in Healthy Subjects (%)*
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Table 3. Percentage of Proliferating Cells in Patients with B-CLL (%)*
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We compared two well-established bcl-2 antisense ODN: the sequence G3139, which is tested currently in clinical trials, and the sequence NOV 2009, which inhibits bcl-2 in vitro but for which no antitumor activity in animal models has been demonstrated. Antisense-mediated inhibition of bcl-2 expression was not observed unless ODN delivery was increased by cationic lipids. Without cationic lipids, NOV 2009 showed no effect on bcl-2 expression of B cell leukemia cell lines or primary B-CLL cells.
There was no significant change of bcl-2 expression in primary B-CLL cells. Unexpectedly, bcl-xL, which was used as a control protein to test antisense specificity, was up-regulated consistently by G3139 but not by NOV 2009. The concept that the biological effects of G3139 are a result of immunostimulatory properties rather than antisense effects was further supported by the observation that G3139 but not NOV 2009 strongly increased the expression of a panel of surface markers, including costimulatory molecules and antigen-presenting molecules as well as CD20. All of these markers have been shown to be up-regulated specifically by CpG ODN [39 40 41 ]. Although qualitatively, G3139 and ODN 2006 showed the same biological properties, dose-response experiments demonstrated that ODN 2006 was active at lower concentrations than G3139.
ODN 2006 and G3139 had identical biological activities on B-CLL cells regarding bcl-2, bcl-xL, apoptosis, proliferation, and activation markers, suggesting an identical mechanism of action of both ODN. The level of systemic s-TK activity as a measure for the proliferative state of the disease in individual patients correlated negatively with the influence of CG-containing ODN on apoptosis. Similarly, G3139 and ODN 2006 increased spontaneous apoptosis of B-CLL cells from patients with low s-TK (low proliferative state) and decreased apoptosis in patients with high s-TK activity. However, because no linear regression between both parameters was found, the extent of apoptosis modulation is not predicted by the level of s-TK.
The mechanism by which immunostimulatory CG-containing ODN influences apoptosis of B-CLL cells is most likely a result of modulation of apoptosis-associated proteins. Of the two anti-apoptotic proteins examined in this study, bcl-xL was up-regulated consistently by CpG ODN. In contrast, increased bcl-2 was found in all B-CLL samples in which CpG ODN inhibited apoptosis, and decreased bcl-2 levels were observed in samples in which CpG ODN induced apoptosis. Therefore, modulation of bcl-2 rather than bcl-xL seemed to play a major role in the modulation of apoptosis by CpG ODN.
Several groups have demonstrated antisense-mediated inhibition of bcl-2 expression in vitro [17 18 19 , 45 , 50 51 52 53 54 ]. In most of these studies, ODN were delivered to tumor cell lines by cationic lipids. One group has demonstrated bcl-2 inhibition in primary B-CLL cells in vitro using high concentrations of the bcl-2 antisense NOV 2009 [47 ]. In our study, we were unable to show antisense-mediated inhibition of bcl-2 synthesis in B-cell lymphoma cell lines and primary B-CLL cells in the absence of cationic lipids. Antisense-mediated inhibition of bcl-2 by G3139 in primary B-CLL seems to be complicated by non-antisense-mediated up-regulation of bcl-2 in some patients, which abrogates the desired antisense effect. This is not an issue in the case of other malignancies, such as malignant melanoma, because these tumor cells, in contrast to B cells, are not susceptible to immunostimulation.
Although it has been demonstrated that antisense ODN can specifically inhibit gene expression, recent investigations have raised puzzling questions regarding what factors govern their biological activity. For antisense ODN to be active, efficient delivery of ODN into the target cell must be achieved. In vivo, however, antisense ODN are apparently active when given in the free form [20 , 45 , 51 , 55 , 56 ]. It is therefore unclear to what extent therapeutic activity can be attributed to specific antisense-mRNA interactions rather than to systemic immune effects. It is important to note that for phosphorothioate-modified ODN, in contrast to unmodified phosphodiester ODN, the presence of CG dinucleotides within the ODN sequence does not precisely predict the immunostimulatory activity of an ODN, and thus the activity has to be determined empirically [32 ]. Consequently, to examine the possible contribution of immune stimulation in a tumor model, the correct ODN to control for a CpG effect are established CpG ODN (for which immunostimulatory properties have been demonstrated) rather than random CG-containing sequences.
All of the in vivo studies but one [20 ] have been performed with the bcl-2 antisense ODN G3139 [45 , 51 , 55 , 56 ]. This ODN has been tested in tumor models in severe combined immunodeficient (SCID) mice, suggesting that T cells are not required for the observed anti-tumor activity. SCID/Rag-2 mice, which lack B cells as well as T cells, still rejected the tumor in response to systemic anti-bcl-2 antisense ODN administration [45 ]. As CpG ODN are known to activate natural killer (NK) cells [29 ], which are still present in SCID mice, Klasa et al. [45 ] tested G3139 in pfp/Rag-2 mice, which lack perforin-mediated killing of NK cells in addition to the lack of B and T cells. In these mice, anti-tumor activity of G3139 was reduced greatly but was still detectable. Because these mice lack perforin-mediated killing, the remaining activity in this model may be a result of Fas- or TRAIL-mediated killing mechanisms. Alternatively, CpG-activated macrophages or macrophage-derived cytokines such as type I interferon (IFN) [29 , 57 ] may contribute to anti-tumor activity in these mice by a direct effect on tumor cells. Type I IFN is approved for the therapy of non-Hodgkins lymphoma [58 , 59 ] and has shown cytoreduction, but no clinical benefit, in patients with early B-CLL [60 , 61 ].
In a phase I clinical trial, G3139 has been tested in patients with bcl-2-positive, relapsed non-Hodgkins lymphoma. Because the decline in bcl-2 levels was small and no control proteins were measured, the contribution of bcl-2 inhibition to the clinical effects is still unclear [15
]. It is interesting that the major side effects of G3139 included fever, skin inflammation at the site of subcutaneous injection, and painful enlargement of local lymph nodes [21
, 22
]. These observations suggest that G3139 has immunologic activity in humans in vivo. Plasma levels of G3139 associated with dose-limiting toxicity were higher than 4 µg/ml, and thus were within the concentration range, which, in our hands, activated malignant B cells in vitro. Waters et al. [21
] were unable to detect immune activation by G3139 when performing intracellular cytokine staining for interleukin-2, IFN-
, IL-4, and perforin in peripheral blood of four patients as a measure of a systemic T helper cell type 1 response or NK cell activation. However, CpG ODN-mediated activation of T cells requires the presence of a specific antigen triggering the T cell receptor [62
]. Furthermore, activated immune cells usually leave the circulation and thus are not readily accessible by peripheral blood sampling.
Given that ODN 2006 as well as G3139 have a direct, stimulatory effect on malignant B cells, the question remains whether this effect is clinically beneficial or not. Our results demonstrate that, at least for B-CLL, depending on the systemic level of s-TK, ODN 2006 and G3139 may enhance or inhibit apoptosis of malignant B cells. In addition to s-TK-associated regulation of apoptosis by ODN 2006 and G3139, increased expression of costimulatory and antigen-presenting molecules may improve immune recognition and elimination of malignant B cells by immune effector cells. Although it is difficult to predict if this general activation of anti-tumor immunity will outweigh undesired inhibition of apoptosis in patients with high s-TK activity, patients with low s-TK activity are more likely to benefit from CpG ODN therapy.
CpG ODN have not been shown to have any direct effect on tumor cells that do not derive from immune cells. Nevertheless, immunostimulatory properties of ODN may support the immune system to gain control over progressive tumor growth. Anti-tumor activity of CpG ODN has been demonstrated in animal models in which CpG ODN were administered alone or as an adjuvant in conjunction with a tumor vaccine or in combination with tumor-specific antibodies [63 64 65 66 ]. It is difficult to assess to what extent immunostimulatory properties of G3139 contribute to the therapeutic effects seen in animal models and in clinical studies. If immunostimulation indeed contributes to the major part of the anti-tumor activity of G3139, potent CpG ODN are likely to be more effective. In this context, it is interesting to note that many antisense ODN, which are tested in clinical trials, contain CG dinucleotides [67 ] and that some diseases targeted in these trials, such as viral infections and cancer, would most likely benefit from immune stimulation.
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Received August 25, 2001; revised December 8, 2001; accepted February 4, 2002.
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